Acta Biochimica Polonica https://abp.ptbioch.edu.pl/index.php/abp <p><strong>&nbsp;</strong></p> <p><strong>To submit a paper go to Information <a href="/index.php/abp/information/authors">for Authors</a></strong></p> Polskie Towarzystwo Biochemiczne (Polish Biochemical Society) en-US Acta Biochimica Polonica 0001-527X <p><em>Acta Biochimica Polonica</em> is an OpenAccess quarterly and publishes four issues a year. All contents are distributed under the Creative Commons Attribution-ShareAlike 4.0 International (CC BY 4.0) license. Everybody may use the content following terms: Attribution — You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.</p> <p>Copyright for all published papers © stays with the authors.</p> <p>Copyright for the journal: © Polish Biochemical Society.</p> <p><img src="/public/site/images/super_pp/by.png"></p> Imiquimod-induced psoriasis model: induction protocols, model characterization and factors adversely affecting the model https://abp.ptbioch.edu.pl/index.php/abp/article/view/6426 <p>Imiquimod-induced psoriasis is widely-employed to study disease pathogenesis and to screen drugs. While the original protocol was published more than a decade ago and has been rigorously used in research since then, a modified protocol was described recently with several advantages including milder systemic manifestations although the disease morphology is highly conserved. Being a toll-like receptor 7 and 8 agonist, IL-23/IL-17 axis predominates in imiquimod-induced psoriasis. In addition, different immunocytes were described to aggravate or supress the disease. This article aims to review the currently available protocols of imiquimod-induced psoriasis in vivo, to characterize the model as described in literature and to define the five important independent factors adversely influencing the model which researchers should pay attention to.</p> Manahel Mahmood Alsabbagh Copyright (c) 2023 Manahel Mahmood Alsabbagh https://creativecommons.org/licenses/by/4.0 2023-11-22 2023-11-22 70 4 729 733 10.18388/abp.2020_6426 Emerging relationship between hydrogen sulfide and ferroptosis: A literature review https://abp.ptbioch.edu.pl/index.php/abp/article/view/6756 <p>Gaseous hydrogen sulfide (H2S) can function as a signaling molecule similar to nitric oxide or carbon monoxide under physiological conditions, ultimately exerting anti-inflammatory, anti-apoptotic, and antioxidant activities. Many studies have investigated the role of H2S in a variety of biological contexts, and both endogenous H2S and H2S donors have been leveraged as tools for fundamental biomedical research, and it has been suggested that they may provide value for the design of novel therapeutic strategies in the years to come. Ferroptotic cell death is a distinct programmed cell death resulting from excessive lipid peroxidation in an iron-dependent manner, and is characterized by high levels of iron accumulation, reactive oxygen species (ROS) production, and peroxidation of cellular lipids. Several recent studies have revealed a close relationship between ferroproteins and their precursors, H2S, and the enzymes that produce them. This review summarizes the current information pertaining to the relationship between ferroptosis and H2S, with a particular focus on the underlying mechanisms and biological applications of this knowledge.</p> Xiaoming Gao Ke Lu Chong Li Copyright (c) 2023 Xiaoming Gao, Ke Lu, Chong Li https://creativecommons.org/licenses/by/4.0 2023-12-07 2023-12-07 70 4 735 744 10.18388/abp.2020_6756 The specific role of extracellular matrix metalloproteinases in the pathology and therapy of hard-to-heal wounds https://abp.ptbioch.edu.pl/index.php/abp/article/view/6934 <p>Matrix metalloproteinases (MMPs) are zinc-dependent endoproteases responsible for the metabolism of extracellular matrix (ECM). MMPs can degrade the various ECM components as a variety of non-ECM molecules. Hyperactivity of MMPs and improper regulation or inhibition could lead to certain disorders, like non-healing chronic wounds. In chronic wounds, unlike in acute ones, there are always higher levels of MMPs due to the accompanying inflammation. Different proteases are responsible for this condition; nonetheless, blocking MMPs can help restore the wound’s healing ability. The level of MMPs can help indicate the prognosis of chronic wounds. In some cases, the healing process is delayed by microbial wound infections. Bacterial proteases may up-regulate the levels of MMPs produced by host cells. That means that both host MMPs as proteases secreted by the infecting bacteria need to be targeted to increase the healing capacity of the wound. MMPs activity modulating treatments by superabsorbent polymer dressings can improve healing rates of chronic wounds. The main goal of this review was presentation the specific role of metalloproteinases in the pathology and therapy of hard-to-heal wounds.</p> Joanna Trojanek Copyright (c) 2023 Joanna Trojanek https://creativecommons.org/licenses/by/4.0 2023-12-03 2023-12-03 70 4 745 750 10.18388/abp.2020_6934 Molecular and biochemical mechanisms of diabetic encephalopathy https://abp.ptbioch.edu.pl/index.php/abp/article/view/6953 <p>Diabetes mellitus is one of the important independent risk factors for the development of neurological disorders such as ischemic stroke, transient ischemic attacks, vascular dementia and neurodegenerative processes. Hyperglycemia plays a crucial role as a trigger in the pathogenesis of these disorders. In this review, we summarize the existing data on the molecular mechanisms of diabetic encephalopathy development, consider the features of oxidative and nitrosative stresses, changes in the thiol-disulfide system, as well as mitochondrial and endothelial dysfunction in diabetes. We focus on the role of HSP 70 in cellular responses in diabetic encephalopathy. HSP70 protein is an important component of the endogenous system of neuroprotection. It acts as an intracellular chaperone, providing the folding, retention, and transport of synthesized proteins, as well as their degradation under both normoxic and stress-induced denaturation conditions. HSP70 can be considered a molecular marker and a promising therapeutic target in the treatment of diabetes mellitus.</p> Igor Belenichev Olena Aliyeva Olena Popazova Nina Bukhtiyarova Copyright (c) 2023 Igor Belenichev, Olena Aliyeva, Olena Popazova, Nina Bukhtiyarova https://creativecommons.org/licenses/by/4.0 2023-11-22 2023-11-22 70 4 751 760 10.18388/abp.2020_6953 Identification of AHNAK expression associated with the pathogenesis of chronic obstructive pulmonary disease by bioinformatic analysis https://abp.ptbioch.edu.pl/index.php/abp/article/view/6041 <p>Background: Chronic obstructive pulmonary disease (COPD) was a risk factor for lung cancer tumorigenesis. This study aimed to discover novel diagnostic biomarkers for COPD patients and determine their underlying pathogenetic mechanisms. Materials and methods: Differentially expressed genes (DEGs) in COPD samples and normal controls were analyzed and utilized to construct a network associated with a high risk for COPD occurrence. Enrichment analysis was applied on the strength of Gene Ontology (GO) annotations and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. The RT-qPCR analysis was performed to determine 10 hub genes in COPD. ELISA assay was utilized to measure IL-1β, IL-6, and IL-10 levels. Spearman’s correlation analysis was conducted to detect the correlation between inflammatory cytokines and AHNAK expression. Cell proliferation and apoptosis were evaluated by CCK-8 and flow cytometry assays. Results: AHNAK was significantly increased in COPD serum samples compared with non-COPD smokers and strongly correlated with inflammation. AHNAK level could also discriminate COPD from non-COPD with high accuracy. Conclusion: AHNAK may be a feasible biomarker playing crucial functions in the diagnosis and progression of COPD.</p> Chunhui Zhang Yu Liu Copyright (c) 2023 Chunhui Zhang, Yu Liu https://creativecommons.org/licenses/by/4.0 2023-12-05 2023-12-05 70 4 761 766 10.18388/abp.2020_6041 Prognostic value of serum albumin level in patients with diffuse large B cell lymphoma https://abp.ptbioch.edu.pl/index.php/abp/article/view/6171 <p>Objective: To investigate the prognostic value of serum albumin (SA) levels before chemotherapy in patients with diffuse large B-cell lymphoma (DLBCL) after receiving chemotherapy. Methods: This is a retrospective study, and 127 patients with DLBCL including 71 males (55.9%) and 56 females (44.1%) were included. Patients’ gender, age, Ann Arbor staging, eastern cooperative oncology group (ECOG) score, treatment options, international prognostic index, response rate, overall survival (OS), and progression-free survival (PFS) were obtained for statistical analysis. Results: Univariate analysis showed that SA≤34 g/L, Ann Arbor III-IV, B symptoms, ECOG≥2, and bone marrow involvement suggest a poor prognosis in patients with DLBCL. Patients with persistent SA&gt;34 g/L had significantly longer OS than patients with persistent SA≤34 g/L (P=0.020). Multivariate analysis showed that SA≤34 g/L (HR=0.48, 95% CI=0.26-0.90, P=0.022) and R-CHOP-like treatment regimen (HR=0.43, 95% CI=0.24-0.76, P=0.004) are independent factors that could affect the prognosis of patients with DLBCL. Conclusion: SA can be used as an indicator of prognosis in patients with DLBCL before the first chemotherapy. DLBCL patients with SA≤34 g/L are associated with short OS and poor prognosis, which may potentially provide guidance for the clinician to pay more attention to this population before the first chemotherapy.</p> Liyan Chen Lili Pan Tingbo Liu Copyright (c) 2023 Liyan Chen, Lili Pan, Tingbo Liu https://creativecommons.org/licenses/by/4.0 2023-12-05 2023-12-05 70 4 767 776 10.18388/abp.2020_6171 Circular RNA AGFG1 motivates breast cancer cell proliferation, invasion, migration, and glycolysis by controlling microRNA-653-5p/14-3-3 protein epsilon https://abp.ptbioch.edu.pl/index.php/abp/article/view/6254 <p>A recent Pairwise meta-analysis confirmed that circular RNA AGFG1 (circAGFG1) is abnormally highly expressed in breast cancer (BC) and may be associated with death risk. The purpose of this study was to elucidate the biological role of circAGFG1 in BC and to explore its potential downstream molecular mechanisms. CircAGFG1, miR-653-5p and YWHAE expression in BC tissues and cells were analyzed by RT-qPCR or western blot. Gene expression was regulated by transfection of plasmids or oligonucleotides and the biological behaviors of BC cells were analyzed by a series of assays. The ring structure of circAGFG1 was analyzed by RNase R and actinomycin D treatment. Dual luciferase reporter assay and RNA-pull down were used to verify the targeting relationship of circAGFG1 and downstream factors. A nude mouse xenograft experiment was performed to verify the effect of circAGFG1 on cancer cells in vivo. The results showed that circAGFG1 and YWHAE were highly expressed in BC while miR-653-5p was lowly expressed. Both circAGFG1 and YWHAE had a targeting relationship with miR-653-5p. Knockdown of circAGFG1 inhibited BC cell proliferation, invasion, migration, and glycolysis. The inhibitory effect of circAGFG1 knockdown on BC was reversed by silencing miR-653-5p. The inhibitory effect of overexpression of miR-653-5p on malignant behaviors of BC cells was reversed by overexpression of YWHAE. Knockdown of circAGFG1 inhibited tumor growth in vivo. Taken together, these data suggest that circAGFG1 acts as a sponge for miR-653-5p to mediate YWHAE expression to promote the malignant behaviors of BC.</p> Liang Chen JinXian Qian Ying Shen Xiang Yu Copyright (c) 2023 Liang Chen, JinXian Qian, Ying Shen, Xiang Yu https://creativecommons.org/licenses/by/4.0 2023-10-18 2023-10-18 70 4 777 784 10.18388/abp.2020_6254 MicroRNA-221-3p promotes post-burn HUVEC proliferation, migration, and angiogenesis by regulating CDKN1B https://abp.ptbioch.edu.pl/index.php/abp/article/view/6295 <p>Background and objective: Previous studies have shown that miR-221-3p plays an important role in vascular remodeling, but it is unclear whether it contributes to angiogenesis after burn injury. The purpose of this study was to investigate the effect of miR-221-3p on angiogenesis in HUVECs after burn injury and to reveal its underlying molecular mechanism. Methods: The burn HUVECs model was established by heat treatment. Plasmid or oligonucleotide transfection altered the expression of miR-221-3p and CDKN1B in HUVECs. MTT, colony formation, Transwell, flow cytometry, and tube formation experiments were applied to assess the proliferation, migration, apoptosis, cell cycle, and tube formation capacity of HUVECs. miR-221-3p, CDKN1B, Ki-67, and PCNA expression was assessed by RT-qPCR or Western blot. The dual-luciferase reporter assay verified the targeting relationship between miR-221-3p and CDKN1B. Results: miR-221-3p was lowly expressed and CDKN1B was highly expressed in burn HUVECs. Overexpression of miR-221-3p promoted the proliferation, migration, and tube formation ability of burn HUVECs and inhibited apoptosis and the proportion of cells in the G0/G1 phase, whereas overexpression of CDKN1B had the opposite effect. Knockdown of miR-221-3p further inhibited the angiogenic capacity of burn HUVECs, but this effect was reversed by knockdown of CDKN1B. Mechanistically, miR-221-3p targeted CDKN1B. Conclusion: miR-221-3p improves the angiogenesis of burn HUVECs by targeting CDKN1B expression, and the miR-221-3p/CDKN1B axis may serve as a potential molecular target for future burn therapy.</p> Kun Miao Fei Xie JinGui Lin Copyright (c) 2023 JinGui Lin, Kun Miao, Fei Xie https://creativecommons.org/licenses/by/4.0 2023-11-22 2023-11-22 70 4 785 790 10.18388/abp.2020_6295 Simvastatin attenuates diabetes mellitus erectile dysfunction in rats by miR-9-5p-regulated PDCD4 https://abp.ptbioch.edu.pl/index.php/abp/article/view/6315 <p>DMED is a common complication of diabetes, for which new treatment methods are urgently required. Focused on DMED, the pharmacological mechanism of simvastatin (Sim) was probed. A model of DMED was made in rats with streptozotocin and orally medicated with Sim. Lentiviral vectors that interfere with miR-9-5p or PDCD4 were injected, and the erectile function, histopathology of cavernous tissue, and α-SMA expression were evaluated. Cavernous smooth muscle cells (CMSCs) obtained from DMED rats were treated with Sim and transfected with the plasmid vector that interferes with miR-9-5p or PDCD4 to observe cell viability and apoptosis. The binding relationship between miR-9-5p and PDCD4 was checked. After 8-week treatment with Sim, erectile function was improved and the corpus cavernosum injury was alleviated. Upregulating miR-9-5p or downregulating PDCD4 further improved erectile function and cavernous injury in rats. miR-9-5p targeted regulation of PDCD4. In vitro cell experiment results showed that Sim induced proliferation and reduced apoptosis of CSMCs by enhancing miR-9-5p-targeted regulating PDCD4 in vitro. Sim attenuates DMED in rats via miR-9-5p/PDCD4.</p> YiMing Weng YuanShen Mao YanQiu Wang YuFan Jiao Jun Xiang Wei Le Copyright (c) 2023 YiMing Weng, YuanShen Mao, YanQiu Wang, YuFan Jiao, Jun Xiang, Wei Le https://creativecommons.org/licenses/by/4.0 2023-11-06 2023-11-06 70 4 791 797 10.18388/abp.2020_6315 LINC00707 promotes multidrug resistance of ovarian cancer cells by targeting the miR-382-5p/LRRK2 axis https://abp.ptbioch.edu.pl/index.php/abp/article/view/6503 <p>Multidrug resistance severely limits the efficacy of ovarian cancer (OC) treatment. Recent studies have revealed the carcinogenic role of LINC00707 RNA. However, the role of LINC00707 in the development of multidrug resistance in OC has not been clarified. Therefore, the aim of this study was to investigate the relationship between LINC00707 and multidrug resistance in OC, which can facilitate the development of new therapeutic agents for effectively addressing this issue. The RNA expression of LINC00707, miR-382-5p and leucine-rich repeat kinase 2 (LRRK2) in SKOV3 (a human OC cell line) cells was detected by qRT-PCR. The effects of LINC00707 on the proliferation and viability of SKOV3 cells were determined by MTT assay and colony formation assay. The interaction of LINC00707, miR-382-5p, and LRRK2 was bioinformatically predicted and verified with dual-luciferase reporter assay. In addition, the effect of LINC00707 on drug resistance in SKOV3 cells through targeting the miR-382-5p/LRRK2 axis was explored. The expression of LINC00707 and LRRK2 was significantly increased in SKOV3 cells, while miR-382-5p expression was significantly decreased. The results of bioinformatic prediction and colony formation assay demonstrated that LINC00707 could regulate LRRK2 expression in SKOV3 cells by targeting miR-382-5p. Additionally, knockdown of LINC00707 markedly increased expression of miR-382-5p and decreased that of LRRK2, increased cell proliferation and viability, as well as sensitivity to chemotherapeutic agents in SKOV3 cells. Notably, these manifestations were more obvious with simultaneous knockdown of LINC00707 and miR-382-5p compared with knockdown of LINC00707 alone. LINC00707 is overexpressed in SKOV3 cells and promotes SKOV3 cell proliferation and resistance to chemotherapeutic drugs via targeting the miR-382-5p/LRRK2 axis.</p> Min-Wen Zhao Chang-Jie Lin Jian-Ping Qiu Copyright (c) 2023 Min-Wen Zhao, Chang-Jie Lin, Jian-Ping Qiu https://creativecommons.org/licenses/by/4.0 2023-10-03 2023-10-03 70 4 799 806 10.18388/abp.2020_6503 Competitive binding of circCCDC6 to microRNA-128-3p activates TXNIP/NLRP3 pathway and promotes cerebral ischemia-reperfusion defects https://abp.ptbioch.edu.pl/index.php/abp/article/view/6552 <p>Objective: Circular RNAs (circRNAs) are enriched in the brain and involved in various central nervous system diseases. The potential role of circCCDC6 in cerebral ischemia-reperfusion defects was partly elucidated in the work. Methods: A middle cerebral artery occlusion/reperfusion (MCAO/R) rat model and an oxygen-glucose deprivation and re-oxygenation (OGD/R)-treated SH-SY5Y cell model were constructed. CircCCDC6 expression in the two models was examined, and circCCDC6-involved mechanisms in neuronal pyroptosis and inflammation were analyzed through loss- and gain-of-function assays. Results: MCAO/R rat brain tissues and OGD/R-treated SH-SY5Y cells exhibited upregulated circCCDC6. Silencing circCCDC6 attenuated neuronal pyroptosis and inflammation in the brain tissue of MCAO/R rats. Overexpressing circCCDC6 or inhibiting miR-128-3p stimulated OGD/R-induced pyroptosis and inflammation in SH-SY5Y cells, while upregulating miR-128-3p attenuated OGD/R injury. CircCCDC6 silencing-induced effects on SH-SY5Y cells were antagonized by TXNIP overexpression. Conclusion: Mechanistically, circCCDC6 mediates miR-128-3p and activates TXNIP/NLRP3, thereby promoting OGD/R-induced neuronal pyroptosis and inflammation. CircCCDC6 may provide a new strategy for the treatment of MCAO/R.</p> ChongShu Wang MingMing Dong XiaoYi Zhang XiaoYu Wang Yan Zhao Yunpeng Cao Copyright (c) 2023 ChongShu Wang, MingMing Dong, XiaoYi Zhang, XiaoYu Wang, Yan Zhao, Yunpeng Cao https://creativecommons.org/licenses/by/4.0 2023-11-07 2023-11-07 70 4 807 815 10.18388/abp.2020_6552 JNK promotes the progression of castration-resistant prostate cancer https://abp.ptbioch.edu.pl/index.php/abp/article/view/6610 <p>Background: Prostate cancer is one of the most common cancers in men worldwide. This study aims to elucidate the roles of c-Jun N-terminal kinase (JNK) in the progression of castration-resistant prostate cancer (CRPC). Methods: JNK overexpressing and knockdown cell lines were established on the PC-3 prostate cell line. qPCR and Western blotting were performed to determine the mRNA and protein levels of target genes in prostate tissues and cell lines. MTT and Matrigel invasion assays were conducted to evaluate the cell viability and invasive ability, respectively. The Kaplan-Meier estimator was performed to estimate the overall survival rate and second progression-free survival rate. Pearson’s correlation coefficient was used to evaluate the relationship between JNK and prostate-specific antigen (PSA). Results: Relative JNK expression was correlated with Gleason score and PSA value in patients with CRPC. Kaplan-Meier analysis revealed that patients with low JNK expression exhibited high overall survival and second progression-free survival rate. In vitro assays demonstrated that JNK overexpression promoted cell viability and invasion as well as the protein expressions of extracellular signal-regulated kinase (ERK) and matrix metalloproteinase 1 (MMP1) in PC-3 cell lines. Conclusions: JNK overexpression promotes the development of CRPC via the regulation of ERK and MMP1.</p> Yigeng Feng Hongwen Cao Dan Wang Lei Chen Renjie Gao Peng Sun Copyright (c) 2023 Yigeng Feng, Hongwen Cao, Dan Wang, Lei Chen, Renjie Gao, Peng Sun https://creativecommons.org/licenses/by/4.0 2023-12-15 2023-12-15 70 4 817 822 10.18388/abp.2020_6610 Lipid disorders before and after successful liver transplantation https://abp.ptbioch.edu.pl/index.php/abp/article/view/6629 <p>Introduction: Liver transplantation (LTx) is the only successful treatment for end-stage liver disease. The results of liver transplantation depend not only on graft survival but may be also affected by superimposed cardiovascular morbidities. The aim of this retrospective study was to assess the prevalence of lipid disorders as one of the important cardiovascular risk factors in patients before and after successful LTx. Material and Methods: One hundred eleven patients who underwent liver transplantation because of liver cirrhosis and survived at least 2 years with functioning graft between November 2005 and May 2014 were included in this retrospective analysis. The mean age of the patients at the time of liver transplantation was 49.7±12.2 years. The prevalence of dyslipidemia was assessed before and two years after liver transplantation. This was analyzed in relation to the etiology of liver disease, including alcohol toxicity, viral or autoimmune diseases. Results: The prevalence of hypertriglyceridemia before and after LTx was 13.5% and 40.5%, respectively (P&lt;0.001). Similarly, hypercholesterolemia was noted in 17.1% and 51.4% respectively (P&lt;0.001). The annual incidence of hypertriglyceridemia and hypercholesterolemia during the first two years after LTx was 16.2% and 20.7%, respectively. The prevalence of hypertriglyceridemia (18.5% vs 66.7%, P&lt;0.001) and hypercholesterolemia (29.6% vs 70.0%, P=0.002) was significantly lower in patients with the autoimmune cause of liver cirrhosis in comparison to patients with the alcoholic liver disease. Conclusions: The prevalence of dyslipidemia is increased after liver transplantation. The prevalence of dyslipidemia may be related to the cause of liver injury before LTx.</p> Damian Gojowy Joanna Urbaniec-Stompór Joanna Adamusik Gabriela Wójcik Henryk Karkoszka Robert Król Andrzej Więcek Marcin Adamczak Copyright (c) 2023 Damian Gojowy, Joanna Urbaniec-Stompór, Joanna Adamusik, Gabriela Wójcik, Henryk Karkoszka, Robert Król, Andrzej Więcek, Marcin Adamczak https://creativecommons.org/licenses/by/4.0 2023-12-03 2023-12-03 70 4 823 828 10.18388/abp.2020_6629 Genetic association between vitamin D receptor gene and Saudi patients confirmed with Familial Hypercholesterolemia https://abp.ptbioch.edu.pl/index.php/abp/article/view/6638 <p>Introduction: Familial Hypercholesterolemia (FH) is a common condition caused by inherited genetic abnormalities. Inadequate clearance of the circulating low-density lipoproteins (LDL) is the primary cause of the excessive concentrations of LDL seen in FH patients. The relation with vitamin D deficiency and vitamin D receptor (VDR) gene is well documented in the Saudi Arabia. Aim: The aim of this study was to investigate the role of molecular analysis studied between FH patients and fours polymorphisms associated with VDR gene in Saudi Population. Methods: In this case-control study, 120 patients were selected, and 50 patients were confirmed as FH and 70 subjects were confirmed as healthy controls. Genotyping was performed with polymerase chain reaction followed by restriction fragment length polymorphism analysis using ApaI, BsmI, TaqI and FokI polymorphisms in the VDR gene. Results: The current study results confirmed no association between clinical characteristics studied between FH cases and controls (p&gt;0.05). Hardy Weinberg Equilibrium analysis was present in ApaI and FokI polymorphisms (p&lt;0.05). Only ApaI (C vs A: OR-15.1 (95% CI:5.78-39.41); p&lt;0.001; AC+CC vs AA: OR-6.59 (95% CI:2.42-17.95); p=0.0006) and BsmI (G vs A: OR-2.88 (95% CI:1.54-5.38); p=0.0006 and AG+GG vs AA: OR-3.79 (95% CI:1.72-8.35); p=0.0007) polymorphisms showed both allele and genotype association between FH patients and controls. ANOVA analysis confirmed that TG levels were associated (p=0.02) with combination of heterozygous and homozygous genotypes present in all four polymorphisms studied in this population. Conclusion: ApaI and BsmI polymorphisms in the VDR gene showed association with FH patients in the Saudi Population.</p> May Salem Al-Nbaheen Copyright (c) 2023 May Salem Al-Nbaheen https://creativecommons.org/licenses/by/4.0 2023-11-28 2023-11-28 70 4 829 834 10.18388/abp.2020_6638 MicroRNA-508-3p regulates the proliferation of human lung cancer cells by targeting G1 to S phase transition 1 (GSPT1) protein https://abp.ptbioch.edu.pl/index.php/abp/article/view/6660 <p>Purpose: Due to its crucial cancer regulatory role, microRNA-508-3p has been reported as a potential therapeutic anticancer molecular target. The present work encompassed the molecular characterization of microRNA-508-3p in lung cancer emphasizing on understanding the possible mechanism of its regulatory action. Methods: qRT-PCR was performed to estimate the relative gene expression of microRNA-508-p in the tissue samples. The proliferation of cancer cells was determined by cell counting kit-8. The colony formation from cancer cells was analyzed by clonogenic assay. Mitotic phase distribution was understood by employing the flow cytometric technique. Edu-Hoechst staining was used for the assessment of cell viability. In silico analysis and dual-luciferase assay were used for target identification of microRNA-508-3p in lung cancer. Immunofluorescence and western blotting studies were carried out for relative protein expression. The rat models were used for performing the in vivo experimental procedures. Results: The study showed the significant down-regulation of microRNA-508-3p in lung cancer. The lower expression levels of microRNA-508-3p were shown to be associated with poor survival of lung cancer patients. The over-expression of microRNA-508-3p was found to decline the proliferation and viability of cancer cells together with the induction of mitotic cell cycle arrest at G1 by targeting G1 to S phase transition 1 (GSPT1) protein. MicroRNA-508-3p up-regulation inhibited the in vivo tumor growth in rat models. Conclusion: Our study identifies miR-508-3p as a pivotal regulator of lung cancer cell proliferation by targeting the GSPT1 protein. This highlights its potential as a tumor suppressor and a therapeutic target for lung cancer. Our findings offer mechanistic insights into miRNA-mediated cancer progression, prompting further research in this intricate regulatory network.</p> Xingyou Chen Chen Feng Jiliang Zha Zihao Shen Wei Ji Copyright (c) 2023 Xingyou Chen, Chen Feng, Jiliang Zha, Zihao Shen, Wei Ji https://creativecommons.org/licenses/by/4.0 2023-11-22 2023-11-22 70 4 835 841 10.18388/abp.2020_6660 Modified Hongyu Decoction promotes wound healing by activating the VEGF/PI3K/Akt signaling pathway https://abp.ptbioch.edu.pl/index.php/abp/article/view/6674 <p>Wound healing is a considerable problem for clinicians. Ever greater attention has been paid to the role of Chinese herbal monomers and compounds on wound healing. This study aims to elucidate the wound healing mechanism of Modified Hongyu Decoction (MHD) in vivo and in vitro. MHD wound healing activity in vivo was evaluated using an excision rat model. H and E staining, Masson’s staining and immunofluorescence of wound tissue on days 7 and 14 were performed to evaluate the efficacy of MHD on wound healing. Subsequently, human umbilical vein endothelial cells (HUVECs) were used to evaluate wound healing characteristics in vitro. Cell Counting Kit-8 (CCK-8) and scratch assays were conducted to assess the effects of MHD on the proliferation and migration of HUVECs. The involvement of the VEGF/PI3K/Akt signaling pathway was assessed by western blotting. The rats in the MHD group displayed more neovascularization and collagen fibers. Western blotting of wound tissue showed that VEGF, PI3K, p-Akt and p-eNOS expression were significantly increased (p&lt;0.05) in the MHD group. Cell Counting Kit-8 and scratch assays demonstrated that MHD promoted HUVECs proliferation and migration. MHD treatment significantly increased VEGF, PI3K, p-Akt and p-eNOS expression in HUVECs (p&lt;0.05), which was inhibited by LY294002. Both in vivo and in vitro data indicated that MHD promotes wound healing by regulating the VEGF/PI3K/Akt signaling pathway.</p> Xiang Xu Wei-hua Yang Zhi-wei Miao Chun-yu Zhang Yi-jia Cheng Yang Chen Jin-gen Lu Ning He Copyright (c) 2023 Xiang Xu, Wei-hua Yang, Zhi-wei Miao, Chun-yu Zhang, Yi-jia Cheng, Yang Chen, Jin-gen Lu, Ning He https://creativecommons.org/licenses/by/4.0 2023-12-05 2023-12-05 70 4 843 853 10.18388/abp.2020_6674 Circular RNA sirtuin-1 restrains the malignant phenotype of non-small cell lung cancer cells via the microRNA-510-5p/SMAD family member 7 axis https://abp.ptbioch.edu.pl/index.php/abp/article/view/6675 <p>Circular RNA (circRNA) sirtuin-1 (SIRT1) is differentially expressed in non-small cell lung cancer (NSCLC), but its specific mechanism is still uncertain. The study was to figure out the latent molecular mechanism of circSIRT1 in NSCLC. The results clarified that circSIRT1 and SMAD family member 7 (SMAD7) were downregulated, but microRNA (miR)-510-5p was upregulated in NSCLC. CircSIRT1 expression was linked with tumor–node–metastasis staging and tumor size in NSCLC patients. Elevating circSIRT1 or suppressing miR-510-5p refrained NSCLC cell activities and glycolysis and inactivated the wnt/β-catenin pathway, while knockdown of circSIRT1 promoted the malignant behavior of NSCLC cells. Besides, inhibition of malignant behavior in NSCLC cells by elevating circSIRT1 was reversed by knockdown of SMDA7. circSIRT1 bound to miR-510-5p to target SMAD7. In short, circSIRT1 represses NSCLC cell malignant development via miR-510-5p to target SMAD7, making it a latent target for NSCLC treatment.</p> ZiRan Zhao HongYan Zhang Fan Zhang Ying Ji Yue Peng Fei Wang Liang Zhao Copyright (c) 2023 ZiRan Zhao, HongYan Zhang, Fan Zhang, Ying Ji, Yue Peng, Fei Wang, Liang Zhao https://creativecommons.org/licenses/by/4.0 2023-10-18 2023-10-18 70 4 855 863 10.18388/abp.2020_6675 Anesthesia and surgery induce changes in endogenous brain protective protein (RNF146) and delirium-like behavior in aged rats https://abp.ptbioch.edu.pl/index.php/abp/article/view/6720 <p>Background: Postoperative delirium (POD) is a common complication after anesthesia and surgery, especially in the elderly. RNF146 has neuroprotective effects in cerebral ischemia, hypoxia, and chronic neurological diseases. However, whether RNF146 expression is related to the occurrence and development of POD remains unclear. Therefore, in this study, we aimed to determine whether RNF146 is involved in the occurrence of POD. Methods: (Sprague-Dawley) male rats (18 months old) were splenectomized under sevoflurane anesthesia. The cognitive function of rats at 1, 3, and 7 d after anesthesia and surgery was evaluated. Changes in the expression of neuroinflammatory cytokines, IL-6 and IL-10, and RNF146 were measured in the hippocampus in both control group (con) and anesthesia (AS) group. We examined cognitive outcomes and expression of inflammatory factors and RNF146 in con and AS mice using cluster analysis. Results: The cognitive ability and mobility of rats after anesthesia and surgery at day 1, 3, and 7 decreased, especially at day 3. Similarly, the expression of neuroinflammatory factors and RNF146 increased after anesthesia and surgery at day 1, 3, and 7, and the increase was highest at day 3. The clustering and correlation analysis of RNF146 expression in the hippocampi of elderly rats revealed a correlation between POD and neuroinflammation resulting from anesthesia and surgery. Conclusion: Anesthesia and surgery can lead to POD and neuroinflammation. The expression of RNF146 correlates with delirium and neuroinflammation caused by anesthesia and surgery.</p> Yubo Gao Xu Han Xiuhua Li Shaling Tang Chun Zhang Xiaoxia Yang Majid Alhomrani Abdulhakeem S. Alamri Ghulam Nabi Xinli Ni Copyright (c) 2023 Yubo Gao, Xu Han, Xiuhua Li, Shaling Tang, Chun Zhang, Xiaoxia Yang, Majid Alhomrani, Abdulhakeem S. Alamri, Ghulam Nabi, Xinli Ni https://creativecommons.org/licenses/by/4.0 2023-10-26 2023-10-26 70 4 865 873 10.18388/abp.2020_6720 A novel ferroptosis-related gene signature associated with cuproptosis for predicting overall survival in breast cancer patients https://abp.ptbioch.edu.pl/index.php/abp/article/view/6722 <p>Purpose Ferroptosis and cuproptosis are both metal-dependent regulated cell death that play an important role in cancer. However, the expression patterns and the prognostic values of ferroptosis-related genes (FRGs) associated with cuproptosis in breast cancer (BC) are largely unknown. This study aims to explore the prognostic value of cuproptosis-related FRGs and their relationship with tumor microenvironments in BC. Methods The clinical and RNA sequencing data of BC patients from TCGA, METABRIC and GEO databases were analyzed. The least absolute shrinkage and selection operator regression analysis was used to establish prognostic signatures based on cuproptosis-related FRGs. The overall survival between risk subgroups was assessed by Kaplan-Meier analysis. The changes in risk score during neoadjuvant chemotherapy, and differences in immune cells, immune checkpoints, and drug sensitivity between risk subgroups were also analyzed in this study. Results A successful development of a prognostic signature based on cuproptosis-related FRGs in the TCGA cohort was achieved and it was validated in the METABRIC cohort. Gene set enrichment analysis results revealed the enrichment of steroid biosynthesis and ABC transporters in the high-risk group. Moreover, the signature was also found to be associated with immune cells and immune checkpoints. Lower risk score in patients after neoadjuvant chemotherapy and higher sensitivity of the high-risk group to AKT inhibitor VIII and cisplatin was also observed. Conclusion Cuproptosis-related FRGs can be used as a novel prognostic signature for predicting the overall survival of BC patients. This can provide meaningful insights into the selection of immunotherapy and antitumor drugs for BC.</p> Xiaoyu Zhang Qunchen Zhang Copyright (c) 2023 Xiaoyu Zhang, Qunchen Zhang https://creativecommons.org/licenses/by/4.0 2023-11-06 2023-11-06 70 4 875 884 10.18388/abp.2020_6722 Mutational analysis of FOLR1 and FOLR2 genes in children with Myelomeningocele https://abp.ptbioch.edu.pl/index.php/abp/article/view/6729 <p>Myelomeningocele (MMC) is a congenital disease. For a long time, molecular mechanism of MMC, the role of folate receptor and transporter proteins remain unclear. Folate from maternal lumen to developing embryo is carried out with the help of folate transporters (SLC46A1, SLC19A1, FOLH1 and SLC25A32) and folate receptor (FOLR1, FOLR2 and FOLR3). Due to the loss of function of these important genes, complications can facilitate the risk of MMC. This study focused on the mutational analysis of FOLR1 and FOLR2 genes in children suffering from MMC. Myelomeningocele is a rare disorder so twenty blood samples from the children were collected. Primers of selected exons for FOLR1 and FOLR2 genes were designed with the help of PrimerFox software. Extracted DNA was amplified, and PCR based mutational analysis was done to check any type of mutation/SNPs in these genes. Sanger sequencing method was performed to confirm mutation in FOLR1 and FOLR2 genes. The results showed that certain environmental factors (smoking, low socio-economic status of mother bearing MMC fetus) were found to be significantly (P&lt;0.05) associated with MMC but no mutation in the selected exons of FOLR1 and FOLR2 genes was detected. Thus, genetic variations in the folate transporter gene may have no role in the progression of MMC in the studied population.</p> Nageen Hussain Saira Malik Tayyaba Faiz Fiza Shafqat Ayaz Ali Khan Taqweem Ul Haq Waqar Ali Tariq Aziz Metab Alharbi Abdulrahman Alshammari Abdullah F. Alasmari Copyright (c) 2023 Nageen Hussain, Saira Malik, Tayyaba Faiz, Fiza Shafqat, Ayaz Ali Khan, Taqweem Ul Haq, Waqar Ali, Tariq Aziz, Metab Alharbi, Abdulrahman Alshammari, Abdullah F. Alasmari https://creativecommons.org/licenses/by/4.0 2023-10-26 2023-10-26 70 4 885 889 10.18388/abp.2020_6729 Chrysophanol ameliorates oxidative stress and pyroptosis in mice with diabetic nephropathy through the Kelch-like ECH-associated protein 1/nuclear factor erythroid 2-related factor 2 signaling pathway https://abp.ptbioch.edu.pl/index.php/abp/article/view/6778 <p>Diabetic nephropathy (DN), a microvascular complication of diabetes, increases the risk of all-cause diabetes and cardiovascular mortalities. Moreover, oxidative stress and pyroptosis play important roles in the pathogenesis of DN. Rhubarb is widely used in traditional medicine, and chrysophanol (Chr), a free anthraquinone compound abundant in rhubarb, exhibits potent antioxidant properties and ameliorates renal fibrosis. Therefore, this study aimed to investigate the effects of Chr on renal injury, oxidative stress, and pyroptosis in mice with DN. A DN model was established by feeding the mice a high-sugar and fat diet and injecting them with 50 mg/kg streptozotocin as a positive control. The DN mice had significantly impaired renal function, thickened glomerular thylakoids and basement membranes, increased fibrous tissue, and inflammatory cell infiltration. Superoxide dismutase (SOD) levels were reduced, malondialdehyde (MDA) levels were increased, interleukin (IL)-1β and IL-18 increased, and cleaved caspase-1, caspase-1, and gasdermin D (GSDMD) involved in the process of pyroptosis were upregulated in DN. Kelch-like ECH-associated protein 1 (Keap1) expression was upregulated, and nuclear factor erythroid 2-related factor 2 (Nrf2) expression was downregulated. Compared to those in the DN group, the Chr-treated mice with DN had improved renal dysfunction, weakened glomerular thylakoid and basement membrane thickening, and reduced fibrous tissue proliferation and inflammatory cell infiltration. Additionally, Chr increased SOD levels, decreased MDA, IL-1β, and IL-18, down-regulated caspase-1, cleaved caspase-1, GSDMD, and Keap1 expression, and upregulated Nrf2 expression, which reversed the DN. Therefore, Chr reduced oxidative stress and pyroptosis in DNmice by activating the Keap1/Nrf2 pathway.</p> Xinzhu Yuan Wenwu Tang Changwei Lin Hongni He Lingqin Li Copyright (c) 2023 Xinzhu Yuan, Wenwu Tang, Changwei Lin, Hongni He, Lingqin Li https://creativecommons.org/licenses/by/4.0 2023-11-29 2023-11-29 70 4 891 897 10.18388/abp.2020_6778 Relationship between chemical industrial environment and allergic skin diseases https://abp.ptbioch.edu.pl/index.php/abp/article/view/6797 <p>Objective: This study is an exploration of the relationship between chemical industrial environment and allergic skin diseases. Methods: In this retrospective analysis, 200 patients with allergic skin diseases who worked or lived in a chemical industrial zone and were admitted in our hospital between January 2018 and January 2020 were enrolled as Group A. Besides, 500 patients with allergic skin disease who lived in Zhenhai New District, five kilometers away from the chemical radiation zone, were selected as Group B. The specific immunoglobulin E (IgE) levels were determined by Western blotting. The allergen positivity, as well as allergen positivity between different age, sex and body mass index (BMI) were compared between the two groups. The positive food-specific allergen IgE antibody (sIgE) and positive inhalational sIgE were compared between the two groups. Results: The positive rate of total IgE and inhalational sIgE in Group A was higher than that in Group B (P&lt;0.05), while there was no significant difference in positive rate in food sIgE between the two groups (P&gt;0.05). In Group A, the differences in positive rates of total IgE, food-induced sIgE and inhalational sIgE were not significant between patients with different ages, sexes and BMI (P&gt;0.05). There was no significant difference between the two groups in sIgE positive rates of wheat, mango, soybean/peanut/cashew nut combination, limb/beef combination, crab/shrimp/fish combination, milk and egg white (P&gt;0.05). The positive rates of inhalational sIgE in tree combination and dust mites/household dust mites combination in Group A were higher than those in Group B (P&lt;0.05), but had no significant difference between the two groups in the positive rates of inhalational sIgE in Humulus japonicus, mold combination 1, cockroach, cat/dog hair combination, and ragweed/artemisia combination (P&gt;0.05). Conclusion: Chemical industrial environment is closely associated with allergic dermatosis, and the positive rate of total IgE and inhalational sIgE increases significantly in patients living there.</p> Shaohua Fu Minli Gong Guisheng Xing Copyright (c) 2023 Shaohua Fu, Minli Gong, Guisheng Xing https://creativecommons.org/licenses/by/4.0 2023-12-03 2023-12-03 70 4 899 904 10.18388/abp.2020_6797 miRNA-301 As a molecule promoting necrotizing enterocolitis by inducing inflammation https://abp.ptbioch.edu.pl/index.php/abp/article/view/6806 <p>Objective: Necrotizing enterocolitis (NEC) is a devastating inflammatory disease with high morbidity and mortality, mainly affecting premature infants. This study aimed to explore the role of miRNA-301a in the pathogenesis of NEC. Methods: The differentially expressed miRNAs and mRNAs were screened by collating RNA-Seq data from the GEO database of intestinal tissue samples. The differential miRNA-mRNAs regulatory network was constructed based on functional enrichment analysis. Newborn BALB/c mice were used to establish the NEC model. Haematoxylin and eosin staining was used to assess intestinal damage. The levels of IL-8 and TNF-α in mouse serum were evaluated by ELISA. qRT-PCR was used to detect the expression of miRNA-301a in intestinal tissues. Results: Bioinformatics analysis showed that miRNA-301a was involved in intestinal lesions. Intestinal tissue damage was reduced and serum levels of the inflammatory cytokines IL-8 and TNF-α were lower in NEC model mice treated with miRNA-301a antagonists. The level of miRNA-301a in intestinal tissues of NEC model mice was significantly higher than in the control group and miRNA-301a antagonists treated group. Conclusion: miRNA-301a plays an important role in the pathogenesis of NEC by promoting inflammation, and is a potential therapeutic target of NEC.</p> Dajun Zou Fude Hu Qili Zhou Xiaoqing Xu Copyright (c) 2023 Dajun Zou, Fude Hu, Qili Zhou, Xiaoqing Xu https://creativecommons.org/licenses/by/4.0 2023-11-28 2023-11-28 70 4 905 910 10.18388/abp.2020_6806 Value evaluation of serum (sdLDLc*HCYc)/HDLc ratio in the stability of intracranial arterial plaques in patients with acute cerebral infarction https://abp.ptbioch.edu.pl/index.php/abp/article/view/6817 <p>Background: We aimed to analyze the value of serum (sdLDLc*HCYc)/HDLc ratio in the stability of intracranial arterial plaques among patients with acute cerebral infarction. Methods: A retrospective analysis was conducted on 140 patients with acute cerebral infarction admitted to the neurology department and 101 healthy individuals for regular examinations in our hospital from 2013 to 2019, who were respectively allocated into the study group and the control group. Participants in both groups were measured for serum sdLDLc, HDLc, and HCYc using peroxidase method, enzyme-linked immunosorbent assay, and enzyme method, respectively. The laboratory indexes of the two groups were compared. The multivariate logistic regression analysis was done to analyze the influencing factors of the stability of intracranial artery plaque in patients with acute cerebral infarction. The value of high-density lipoprotein cholesterol (HDL-C), homocysteine, sdLDLc, (sdLDLc*HCYc)/HDLc in diagnosing the stability of intracranial artery plaque was also evaluated in patients with acute cerebral infarction. Results: There was no distinct difference in height, hypertension, diabetes, coronary heart disease, smoking history and drinking history between the two groups (P&gt;0.05). The study group showed statistically significant differences in age, gender, weight, and BMI (P&lt;0.05). The current study demonstrated no statistical difference in the levels of TG, low-density lipoprotein cholesterol (LDL-C), α-lipoprotein, and HCYc between the two groups (P&gt;0.05). However, the levels of TC, HDL-C, sdLDLc, (sdLDLc*HCYc)/HDLc in the study group were significantly different when comparing with the control group (P&lt;0.05). No statistically significant difference was found in the levels of TG, triglycerides, LDL-C, α-lipoprotein, and HCYc among patients with different degrees of stenosis in the study group (P&gt;0.05). The level of HDL-C was significantly lower in cases of severe stenosis compared to no stenosis, mild stenosis and moderate stenosis, with severe stenosis showing the lowest levels; mild stenosis had lower levels than no stenosis, while moderate stenosis had lower levels than both no stenosis and mild stenosis (P&lt;0.05). The levels of sdLDLc, (sdLDLc*HCYc)/HDLc exhibited a significant increase in cases of severe stenosis as compared tono stenosis, mild stenosis, and moderate stenosis. Furthermore, the levels of sdLDLc, (sdLDLc*HCYc)/HDLc were found to be higher in moderate stenosis as compared to no stenosis and mild stenosis. Similarly, the levels of sdLDLc, (sdLDLc*HCYc)/HDLc were observed to be higher in mild stenosis than no stenosis (P&lt;0.05).The independent variables were set as the indicators with difference in single factor comparison, including age, gender, BMI, TC, LDL-C, HDL-C, HCYc, sdLDLc, (sdLDLc*HCYc)/HDLc. The dependent variable was the stability of intracranial artery plaque in patients with acute cerebral infarction. After variable selection, the results showed that the factors influencing the stability of intracranial artery plaque in patients with acute cerebral infarction were age, BMI, (sdLDLc*HCYc)/HDLc. The degree of plaque enhancement was used as a criterion to reflect the stability of plaque. ROC curve analysis showed that (sdLDLc*HCYc)/HDLc had a higher evaluation value for the stability of intracranial artery plaque than HDL-C, homocysteine, and sdLDLc in patients with acute cerebral infarction. Conclusion: The serum (sdLDLc*HCYc)/HDLc ratio was found to have potential in evaluating the stability of intracranial arterial plaques in patients with acute cerebral infarction.</p> Hongyu Hao Xing Xing Yajing Li Hongshan Chu Lei Zhao Siqi Cheng Yang Liu Tiankui Wang Nan Meng Ruisheng Duan Copyright (c) 2023 Hongyu Hao, Xing Xing, Yajing Li, Hongshan Chu, Lei Zhao, Siqi Cheng, Yang Liu, Tiankui Wang, Nan Meng, Ruisheng Duan https://creativecommons.org/licenses/by/4.0 2023-12-07 2023-12-07 70 4 911 917 10.18388/abp.2020_6817 Hepatic Mcpip1 regulates adaptation to food restriction in mice https://abp.ptbioch.edu.pl/index.php/abp/article/view/6819 <p>Monocyte-chemoattractant protein-induced protein 1 (MCPIP1, or Regnase-1) is an endoribonuclease that degrades translationally active mRNA molecules. MCPIP1 is mostly known for its anti-inflammatory actions, but it is also an important regulator of adipogenesis and lipid metabolism. Its overexpression impairs adipogenesis by reducing mRNA levels of C/EBPβ and PPARγ, key transcription factors regulating this process. Although adipocytes overexpressing MCPIP1 are characterised by impaired glucose uptake, the function of MCPIP1 in hepatocyte metabolism remains unknown. In this study, conditional deletion of Zc3h12a in murine liver epithelial cells was used to characterise the role of Mcpip1 in adaptation to 24-hour food restriction. We found that Mcpip1 deficiency in liver epithelial cells (Mcpip1<sup>fl/fl</sup>Alb<sup>Cre</sup> mice) resulted in higher blood glucose levels in response to fasting in comparison to Mcpip1<sup>fl/fl</sup> counterparts. Hepatic proteome analysis showed 26 down-regulated and 117 up-regulated proteins in Mcpip1<sup>fl/fl</sup>Alb<sup>Cr</sup>e animals that were involved in cellular adhesion, extracellular matrix and metabolic processes. In conclusion, our studies provide new insight into the hepatic function of Mcpip1 and its involvement in metabolic control.</p> Olga Mucha Bozena Skupien-Rabian Alicja Slota Katarzyna Trzos Natalia Pydyn Bartosz Podlewski Jolanta Jura Jerzy Kotlinowski Copyright (c) 2023 Olga Mucha, Bozena Skupien-Rabian, Alicja Slota, Katarzyna Trzos, Natalia Pydyn, Bartosz Podlewski, Jolanta Jura, Jerzy Kotlinowski https://creativecommons.org/licenses/by/4.0 2023-11-06 2023-11-06 70 4 919 925 10.18388/abp.2020_6819 Isolation, preparation and investigation of leaf extracts of Aloe barbadensis for its remedial effects on tumor necrosis factor alpha (TNF-α) and interleukin (IL-6) by in vivo and in silico approaches in experimental rats https://abp.ptbioch.edu.pl/index.php/abp/article/view/6827 <p>Aloe barbadensis is a stemless plant with a length of 60–100 cm with juicy leaves which is used for its remedial and healing properties in different suburbs of various countries. The present study was conducted to investigate the effect of A. barbadensis leaf extract (aqueous and ethanolic) in yeast induced pyrexia and acetic acid induced writhing in rat model to evaluate the antipyretic biomarkers and its phytochemical screening with computational analysis. For analgesic activity model 60 Albino rats (160–200 kg) were divided into four groups. Of the 4 groups, control consisted of 6 rats (Group I) treated with normal saline, standard comprised of 6 rats treated with drug diclofenac (Group I). Experimental groups consisted of 48 rats, treated with A. barbadensis ethanolic and aqueous leaf extracts at doses of 50 mg/kg, 100 mg/kg, 200 mg/kg, and 400 mg/kg (Group III. IV). For antipyretic activity group division was same as in analgesic activity. All groups were treated the same as in the analgesic activity except for the second group which was treated with paracetamol. In both antipyretic and analgesic activity at the dose of 400 mg/kg, group III showed significant inhibition. TNF–α and IL-6 showed significant antipyretic activity at a dose of 400 mg/kg. For molecular docking aloe emodin and cholestanol were used as ligand molecules to target proteins Tnf-α and IL-6. Acute oral toxicity study was performed. There was no mortality even at the dose of 2000 mg/kg. Quantitative and qualitative phytochemical screening was performed for the detection of various phytochemicals. Hence, A. barbadensis leaf extracts can be used in the form of medicine for the treatment of pain and fever.</p> Iram Khurshaid Sobia Ilyas Nureen Zahra Sohail Ahmad Tariq Aziz Fahad Al-Asmari Sanaa Almowallad Rehab F. Al-Massabi Yasmene F. Alanazi Aminah A. Barqawi Roaa Mohammed Tahir Kassim Abdulhakeem S Alamri Majid Alhomrani Manal Y Sameeh Copyright (c) 2023 Iram Khurshaid, Sobia Ilyas, Nureen Zahra, Suhail Ahmad, Tariq Aziz, Fahad Al-Asmari, Sanaa Almowallad, Rehab F. Al-Massabi, Yasmene F. Alanazi, Aminah A. Barqawi, Roaa Mohammed Tahir Kassim, Abdulhakeem S Alamri, Majid Alhomrani, Manal Y Sameeh https://creativecommons.org/licenses/by/4.0 2023-11-08 2023-11-08 70 4 927 933 10.18388/abp.2020_6827 LncRNA MIR31HG promotes cell proliferation and invasive properties of the MCF-7 cell line by regulation of receptor-interacting serine-threonine kinase 4 https://abp.ptbioch.edu.pl/index.php/abp/article/view/6842 <p>LncRNA MIR31HG is involved in many types of cancers, while its roles in breast cancer are still unknown. The current study aimed to explore the function of lncRNA MIR31HG in breast cancer and the underlying mechanisms. Stable expression cell lines were constructed by using lentivirus particles. MTT assay was used to determine cell viability. Wound healing and Transwell assay were used to determine cell migration and invasion, respectively. The changes in biomarkers were determined by using qPR-PCT and Western blotting, respectively. BALB/c nude mice were used to generate a xenograft mouse model. MIR31HG regulated cell proliferation, migration and invasion in MCF7 cells. Besides, MIR31HG regulated N-Cadherin, Vimentin, and E-Cadherin. MIR31HG positively regulated receptor-interacting serine-threonine kinase 4 (RIPK4), as supported by the fact that knockdown of MIR31HG suppressed RIPK4, and the knockdown of RIPK4 did not affect MIR31HG. Additionally, we found that RIPK4 regulated cell proliferation, migration and invasion in MCF7 cells. The changes in RIPK4 regulated N-Cadherin, Vimentin, and E-Cadherin. Consistently, in vivo studies showed that the knockdown of MIR31HG or RIPK4 reduced tumor size in xenograft animal models. The roles of lncRNA MIR31HG in breast cancer were associated with its regulatory effects against RIPK4.</p> Jingwei Tang Xiaojing Zhang Chunchun Chen Binbin Wang Yansong Chen Hao Zhang Mengxiang Qiao Xianfu Liu Wei Guo Gongsheng Jin Copyright (c) 2023 Jingwei Tang, Xiaojing Zhang, Chunchun Chen, Binbin Wang, Yansong Chen, Hao Zhang, Mengxiang Qiao , Xianfu Liu, Wei Guo, Gongsheng Jin https://creativecommons.org/licenses/by/4.0 2023-12-08 2023-12-08 70 4 935 941 10.18388/abp.2020_6842 Relative expression levels of growth hormone gene and growth rate in Indian major carp species https://abp.ptbioch.edu.pl/index.php/abp/article/view/6864 <p>The phenomenon of growth is a leading factor for aquaculture success. The uneven growth of major Indian carps (Labeo rohita, Catla catla, and Cirrhinus mrigala) is a serious issue in fish culture from an economic point of view. The growth hormone (GH) gene is crucial for selection in commercially cultivated fish species for better growth and production. Indian major carp (L. rohita, C. catla, and C. mrigala) are commonly cultured in Pakistan. The GH expression was examined using qPCR to understand growth in fish species better. Muscle tissue samples (n=480) from 160 individuals of the same age were collected from three species (L. rohita, C. catla, and C. mrigala). Individuals were divided into two groups (high-weight and low-weight groups), cultured under normal conditions. The housekeeping gene β-actin validated GH expression in fast and slow-growing fishes from the same species. Results showed that GH expression varies across species and fish specimens that overweight their counterpart feature have higher GH expression. A selection for overweight fish in the aquaculture breeding systems is preferable as those fish could inherit their genomics to the future cohort, enhancing production, and commercial profit for farmers. Comprehensive research about different growth genes and the environmental aspects that influence fish growth is mandatory. No work has been reported regarding the growth gene analysis of fish from Pakistan. This report was Pakistan’s first and baseline study regarding growth analysis of main culturable fish species at the molecular level.</p> Shahid Sherzada Muhammad Nauman Sharif Qurban Ali Saeed Akram Khan Tawaf Ali Shah Mohamed A. M. El-Tabakh Tariq Aziz Ghulam Nabi Metab Alharbi Thamer H. Albekairi Abdullah F Alasmari Copyright (c) 2023 Shahid Sherzada, Muhammad Nauman Sharif, Qurban Ali, Saeed Akram Khan, Tawaf Ali Shah, Mohamed A. M. El-Tabakh, Tariq Aziz, Ghulam Nabi, Metab Alharbi, Thamer H. Albekairi, Abdullah F Alasmari https://creativecommons.org/licenses/by/4.0 2023-11-14 2023-11-14 70 4 943 949 10.18388/abp.2020_6864 The relationship between EMG high frequency and low frequency band amplitude changes correlates with tissue inorganic phosphate levels https://abp.ptbioch.edu.pl/index.php/abp/article/view/6893 <p>Assessing inorganic phosphate levels seems crucial in deciphering the biochemical state of organisms or tissues. The concentration of inorganic phosphate in blood is an order of magnitude smaller than in tissues and, on top of that, it is dynamically used to fill temporary gaps in tissues. This is the reason blood inorganic phosphate level is considered a poor proxy for tissue levels. Therefore, tissue biopsy seems to be the dominant method when assessing inorganic phosphate levels for instance in muscles. In this study, we attempted to derive a non-invasive biomarker for phosphate tissue levels. We analyzed surface electromyography signals taken during 31P spectroscopy of leg muscles in five adult pigs. We induced hypophosphatemia via 20 minutes-long hyperventilation. It turned out that the proportion of the amplitude of the low frequency band and the high frequency band is significantly (p=0.002) correlated with the relative phosphate levels. The electromyographic signal did not correlate significantly with pCO2 levels in the blood, suggesting that the changes in the signal are a result of inorganic phosphate levels, not hyperventilation. The results might lead to the development of a real-time phosphate fluctuations measurement procedure.</p> Małgorzata Habich Bartosz Pawlinski Kamil Lorenc Maria Sady Katarzyna Siewruk Piotr Zielenkiewicz Zdzislaw Gajewski Jaroslaw Poznanski Leszek Paczek Pawel Szczesny Copyright (c) 2023 Małgorzata Habich, Bartosz Pawlinski, Kamil Lorenc, Maria Sady, Katarzyna Siewruk, Piotr Zielenkiewicz, Zdzislaw Gajewski, Jaroslaw Poznanski, Leszek Paczek, Pawel Szczesny https://creativecommons.org/licenses/by/4.0 2023-10-18 2023-10-18 70 4 951 954 10.18388/abp.2020_6893 The cadherin protein CDH19 mediates cervical carcinoma progression by regulating AKT/NF-κB signaling https://abp.ptbioch.edu.pl/index.php/abp/article/view/6902 <p>The cell adhesion protein cadherin 19 (CDH19) has been reported to be involved in various types of cancer, but its role in cervical carcinoma remains unknown. We collected and analyzed the patients’ data using the GEPIA Kaplan-Meier plotter databases. CDH19 was overexpressed in cervical carcinoma cells to assess its effect on cell proliferation and activation of AKT and NF-κB signaling pathways. A xenograft mouse model was established to study the function of CDH19 in vivo. We found that CDH19 expression was significantly downregulated in cervical carcinoma tissues compared to adjacent normal tissues. Patients with high expression of CDH19 had a significantly better overall survival rate than those with low CDH19 expression. CDH19 expression was negatively correlated with the expression of the proliferation marker Ki-67, and overexpression of CDH19 significantly inhibited cervical carcinoma cell proliferation. Furthermore, overexpression of CDH19 suppressed the activation of the AKT and NF-κB signaling pathways, and CDH19-overexpressing cervical carcinoma tumors exhibited significantly slower growth in vivo. CDH19 plays an important role in cervical carcinoma by suppressing both cell proliferation and the activation of AKT and NF-κB signaling pathways. Therefore, CDH19 may be a potential therapeutic target for cervical carcinoma.</p> Jia Yu Xin Sun Yani Yu Xiaorong Cui Copyright (c) 2023 Jia Yu , Xin Sun , Yani Yu , Xiaorong Cui https://creativecommons.org/licenses/by/4.0 2023-12-05 2023-12-05 70 4 955 961 10.18388/abp.2020_6902 Mapping the substrate-binding subsite specificity of a Porphyromonas gingivalis Tpr peptidase https://abp.ptbioch.edu.pl/index.php/abp/article/view/6904 <p>Calcium-dependent peptidases of the calpain family are widespread in eukaryotes but uncommon in prokaryotes. A few bacterial calpain homologs have been discovered but none of them have been characterized in detail. Here we present an in-depth substrate specificity analysis of the bacterial calpain-like peptidase Tpr from Porphyromonas gingivalis. Using the positional scanning hybrid combinatorial substrate library method, we found that the specificity of Tpr peptidase differs substantially from the papain family of cysteine proteases, showing a strong preference for proline residues at positions P2 and P3. Such a degree of specificity indicates that this P. gingivalis cell-surface peptidase has a more sophisticated role than indiscriminate protein degradation to generate peptide nutrients, and may fulfil virulence-related functions such as immune evasion.</p> Dominika Staniec Wioletta Rut Marcin Drag Michal Burmistrz Michael Kitching Jan Potempa Copyright (c) 2023 Dominika Staniec, Wioletta Rut, Marcin Drag, Michal Burmistrz, Michael Kitching, Jan Potempa https://creativecommons.org/licenses/by/4.0 2023-12-08 2023-12-08 70 4 963 969 10.18388/abp.2020_6904 Investigation of microbiological safety of dry cat foods marketed in Poland https://abp.ptbioch.edu.pl/index.php/abp/article/view/6921 <p>Pets are inhabiting more and more human homes every year. In 2020, the cat population in Europe was 110 million, including 6.8 million in Poland. Dry food is the most popular dietary model for cats because of its easy storage and efficient satisfaction of pet needs. The high processing temperature of dry food reduces the chance of microbial contamination, but this can occur later, during post-production or storage in the pet’s caregiver’s home or, in the case of weighed foods, in the store. The purpose of this study was to investigate the microbiological safety of dry feed sold in the original manufacturer’s packaging and the same feed from the same manufacturers sold in a retail store by weight. Six discriminants, presence of Salmonella spp., number of coliforms, number of coagulase-positive staphylococci, determination of yeast and mould counts, Enterobacteriaceae count, Listeria monocytogenes and determination of total aerobic microbial count were used for the analysis. Then, cat food was then stored for 45 days according to the manufacturer’s recommendations. Based on the samples tested both after opening and after storage, it was concluded that the dry cat food analyzed posed a law microbiological risk to animals and humans.</p> Joanna Ziętara-Wysocka Olga Sierawska Cansel Taskin Agata Poniewierska-Baran Dominika Bębnowska Rafał Hrynkiewicz Filip Lewandowski Paulina Niedźwiedzka-Rystwej Copyright (c) 2023 Joanna Ziętara-Wysocka, Olga Sierawska, Cansel Taskin, Dominika Bębnowska, Rafał Hrynkiewicz, Filip Lewandowski, Paulina Niedźwiedzka-Rystwej https://creativecommons.org/licenses/by/4.0 2023-11-15 2023-11-15 70 4 971 977 10.18388/abp.2020_6921 Use of sertraline and agomelatine in hemodialysis patients: A case series report https://abp.ptbioch.edu.pl/index.php/abp/article/view/6936 <p>Objective: Major depressive disorder (MDD) is one of the most common psychiatric issues in hemodialysis population. However, the research on proper diagnostic tools and its treatment is still insufficient. The study was performed to investigate the safety and effectiveness of sertraline and agomelatine in a group of hemodialysis patients. Patients and Methods: 78 adult patients from one dialysis centre in Poland were included into the study. The Beck Depression Inventory II (BDI-II) was used to screen for depressive symptoms and was followed by the clinical interview with the psychiatrist. Nine patients diagnosed with major depressive disorder received antidepressant treatment with sertraline or agomelatine, according to the best clinical practice. The additional treatment with vortioxetine was used if the initial one was not effective. The time of observation was 24 weeks. The psychiatric follow up as well as the laboratory data were obtained during the course of observation. Results: All patients receiving sertraline achieved remission of depressive symptoms. In patients receiving agomelatine no remission was observed despite dose augmentation. The side effects of antidepressants were mild and did not result in treatment discontinuation. No abnormalities in liver enzymes levels were observed. In five cases the significant decrease of haemoglobin level was noticed, with no cases of bleeding reported. Conclusion: In patients receiving sertraline the antidepressant effect was satisfactory. No remission of depressive symptoms was observed in patients taking agomelatine. The side effects of antidepressants were mild and transient. Further research on depression treatment in hemodialysis patients is needed, including newer medications.</p> Alicja Kubanek Mateusz Przybylak Przemysław Paul Anna Sylwia Kowalska Michał Błaszczyk Aleksandra Macul-Sanewska Marcin Renke Przemysław Rutkowski Leszek Bidzan Jakub Grabowski Copyright (c) 2023 Alicja Kubanek, Mateusz Przybylak, Przemysław Paul, Anna Sylwia Kowalska, Michał Błaszczyk, Aleksandra Macul-Sanewska, Marcin Renke, Przemysław Rutkowski, Leszek Bidzan, Jakub Grabowski https://creativecommons.org/licenses/by/4.0 2023-12-03 2023-12-03 70 4 979 983 10.18388/abp.2020_6936 Protective effect of tretinoin derivative and TXNRD1 protein on streptozotocin induced gestational diabetes via an age-rage signaling-pathway https://abp.ptbioch.edu.pl/index.php/abp/article/view/6947 <p>Background: In the present study effect of tretinoin derivative was investigated on the pathogenesis of gestational diabetes mellitus (GDM) in mice model in vivo. Materials and Methods: Diabetes was induced in mice by injecting Streptozotocin (STZ) for 5consecutive days at a dose of 65 mg/kg body weight through the intraperitoneal route. Tretinoin derivative was given to the mice at 0.12 and 0.25 mg/kg doses through gavage in normal saline alternately for one week after STZ injection.Results: The results demonstrated that tretinoin derivative administration to the diabetic mice significantly (P&lt;0.05) alleviated the blood FBG and FINS levels. Administration of tretinoin derivative to the diabetic mice significantly (P&lt;0.05) promoted the blood HDL level and alleviated TC and TG levels. The administration of tretinoin derivative to the diabetic mice significantly (P&lt;0.05) alleviated the CRP, IL-6and TNF-α production in pancreatic tissues. Tretinoin derivative administration to the diabetic mice significantly (P&lt;0.05) elevated the SOD activity, and CAT level and lowered the MDA level in pancreatic tissues. The TXNRD1 expression in diabetic mice was comparable to that in the normal group after administration of tretinoin derivativeat the dose of 0.25 mg/kg dose. In silico data demonstrated that tretinoin derivativeinteracts with TXNRD1 protein with the binding affinity ranging from –10 to 9.4 kcal/ mol. Conclusion: In conclusion, tretinoin derivative administration effectively regulated streptozotocin-induced changes in fasting blood glucose, insulin level, high-density lipid level and triglyceride level in diabetic mice in vivo. The streptozotocin-induced excessive production of C-reactive protein and inflammatory cytokines was also down-regulated in diabetic mice on administration of tretinoin derivative. Therefore, tretinoin derivative can be investigated further as a therapeutic agent for the treatment of gestational diabetes mellitus.</p> Wensheng Wang Lin Wang Copyright (c) 2023 Wensheng Wang, Lin Wang https://creativecommons.org/licenses/by/4.0 2023-12-07 2023-12-07 70 4 985 990 10.18388/abp.2020_6947 Decrease of prothrombin level during thrombolysis in acute myocardium infarction https://abp.ptbioch.edu.pl/index.php/abp/article/view/6962 <p>Previously, the direct interactions of Bβ26-42 fibrin residues with prothrombin were demonstrated. It was also shown that forming prothrombin complexes with E- or DDE-fragments causes non-enzymatic prothrombin activation. The direct measuring of the prothrombin level in the blood plasma of patients with acute myocardial infarction (AMI) allowed us to find a situation where such an activation can occur in vivo. Blood coagulation parameters in the blood plasma of patients with AMI were measured at 2 hours, three days, and seven days after the thrombolysis by streptokinase accompanied with intravenous administration of anticoagulants: unfractionated high molecular weight heparin (HMWH) and low-molecular-weight heparin (LMWH). The prothrombin level in the blood plasma of patients with AMI was normal before thrombolytic therapy and substantially decreased after streptokinase administration. This effect was prominent in the case of concomitant anticoagulant therapy with LMWH and was not observed when HMWH was applied. It can be explained by the fact that LMWH preferentially inhibits factor Xa, while the HMWH is an effective inhibitor of both factor Xa and thrombin. This observation suggested that the prothrombin level decrease was caused by the thrombin-like activity and possible autolysis of prothrombin by thrombin. Also, thrombolytic therapy with streptokinase caused the accumulation of fibrin degradation products (FDPs), some of which were able to bind prothrombin. The dramatic decrease of prothrombin level in the blood plasma of patients with AMI during thrombolysis allowed us to conclude the non-enzymatic prothrombin activation with the following autolysis of prothrombin that contributes to the pathology.</p> Daria S. Korolova Alexander M. Parkhomenko Volodymyr Chernyshenko Tamara M. Chernyshenko Nadiya M. Druzhyna Olha V. Hornytska Tetyana M. Platonova Copyright (c) 2023 Daria S. Korolova, Alexander M. Parkhomenko, Volodymyr Chernyshenko, Tamara M. Chernyshenko, Nadiya M. Druzhyna, Olha V. Hornytska, Tetyana M. Platonova https://creativecommons.org/licenses/by/4.0 2023-11-27 2023-11-27 70 4 991 995 10.18388/abp.2020_6962 Dynamic changes of serum miR-105-3p expression and prognostic value evaluation of postoperative thyroid cancer https://abp.ptbioch.edu.pl/index.php/abp/article/view/6398 <p>Objective. To explore the dynamic changes of serum miR-105-3p expression after thyroid cancer surgery and its correlation with clinicopathological manifestations and to evaluate its clinical value as a potential biomarker after surgery. Methods. A total of 100 thyroid cancer patients admitted to Shaanxi Provincial People’s Hospital from November 2020 to August 2021 were selected as the research objects. The aim was to detect the expression of serum miR-105-3p in patients and its correlation with tumor pathological characteristics (pathological type, tumor differentiation, TNM stage, lymph node metastasis), and to detect the dynamic changes of postoperative serum miR-105-3p in patients to evaluate its prognostic value as a potential biomarker. Results. The level of serum miR-105-3p increases in patients with well-differentiated thyroid cancer and lymph node metastasis; the level of serum miR-105-3p gradually decreases with the passage of time after surgery, and there is a significant difference between 4 d after surgery and before surgery; serum miR-105-3p level can significantly distinguish between patients with poor prognosis and good prognosis within 2 years after the operation, and it can predict the improvement of the prognosis of thyroid cancer after surgery. Conclusions. The level of serum miR-105-3p is closely related to the degree of differentiation and lymph node metastasis in patients with thyroid cancer. Its level gradually decreases with the passage of time after surgery. It has a good diagnostic value for the prognosis of thyroid cancer after surgery and when it is expected to become a thyroid cancer surgery. Potential biomarkers for post-diagnosis.</p> JianPing Zhou XiaoLong Song YuFang Li Yu Song Long Wei Ru Yang Copyright (c) 2023 JianPing Zhou, XiaoLong Song, YuFang Li, Yu Song, Long Wei, Ru Yang https://creativecommons.org/licenses/by/4.0 2023-12-19 2023-12-19 70 4 997 1003 10.18388/abp.2023_6398 Metformin promotes the normalization of abnormal blood vessels after radiofrequency ablation deficiency in hepatocellular carcinoma by microRNA-302b-3p targeting thioredoxin-interacting protein https://abp.ptbioch.edu.pl/index.php/abp/article/view/6296 <p>Metformin has shown great promise in the treatment of HCC. Radiofrequency ablation (RFA) deficiency results in recurrence and metastasis of remaining HCC tumors. Here, we aimed to investigate the role and mechanism of metformin in HCC after RFA deficiency. HCC cell line Hep-G2 was selected to simulate RFA deficiency and named HepG2-H cells. After treating cells with different concentrations of metformin (2.5, 5, 10 μM) or transfecting related plasmids, cell proliferation, migration, invasion, apoptosis and angiogenesis were detected, in vitro permeability test was performed, and an angiogenesis-related protein VEGFA was analyzed. The residual HCC model after RFA deficiency was established in mice. Metformin was administered by gavage to detect changes in tumor volume and weight, and CD31 staining was used to observe microvessels. The targeting relationship between miR-302b-3p and TXNIP was demonstrated by the bioinformatics website, dual-luciferase reporter assay, and RNA pull-down assay. The results found that metformin inhibited RFA deficiency-induced growth and angiogenesis of HCC cells in vitro. miR-302b-3p counteracted the therapeutic effect of metformin on RFA deficiency. miR-302b-3p targeted regulation of TXNIP. The up-regulation of TXNIP reversed the effects of overexpression of miR-302b-3p on RFA-deficient HCC cells. Metformin inhibited RFA-deficiency-induced HCC growth and tumor vascular abnormalities in vivo. Overall, metformin promotes the normalization of abnormal blood vessels after RFA deficiency in HCC by miR-302b-3p targeting TXNIP, which can be used to prevent the progression of HCC after RFA.</p> HaiGang Niu ShuYing Dong GuoMing Li ShiLun Wu WenBing Sun Copyright (c) 2023 WenBing Sun, HaiGang Niu, Jian Kong, ShuYing Dong, GuoMing Li, ShiLun Wu https://creativecommons.org/licenses/by/4.0 2023-12-22 2023-12-22 70 4 1005 1014 10.18388/abp.2023_6296